To the stock pot, add the nutmeg, cloves, allspice, bay leaves and cinnamon. Heat on medium low for 1 minute.
1/2 tsp ground nutmeg, 1/2 tsp ground cloves, 1/2 tsp ground all spice, 1 cinnamon stick, 3 bay leaves
Add the beef, the pearl onions, potatoes, garlic and tomato. Then, pour the beef stock, red wine, vinegar, tomato paste and honey. Season with salt and pepper. Bring it to a boil and let it simmer on medium low heat for about 2.5 hours with the lid on or until the beef pulls apart. NOTE: Not everything will be submerged, that's perfectly fine. Also, the key to a great stifado is to not stir it too much and cook it on a low temperature.
1.1 Lbs pearl onions, 1.1 Lbs potatoes, 4 Garlic Cloves, 1 tomato, 17.63 oz Beef stock, 6 oz red wine, 3 Tbsp red wine vinegar, 2 Tbsp tomato paste, 1 Tbsp Greek Honey, Sea salt and pepper